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tRNADB-CE
: tRNA gene database curated manually by experts
Takashi Abe
1
, Toshimichi Ikemura
2
, Junichi Sugahara
3
, Akio Kanai
3
, Yasuo Ohara
2
, Hiroshi Uehara
2
, Makoto Kinouchi
4
,
Shigehiko Kanaya
5
, Yuko Yamada
2
, Akira Muto
6
, Hachiro Inokuchi
2
1
. Niigata Univ.,
2
. Nagahama Inst. of Bio-Sci. and Tech.,
3
. Keio Univ.,
4
. Yamagata Univ.,
5
. NAIST,
6
. Hirosaki Univ.
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HOW TO USE
tRNA gene List
microbial fraction from reduced sediments of the Soudan Mine (Minnesota)
HIT:
8 sequence(s).
Download Sequence
View ClustalW result
The reliable tRNA genes
All candidate tRNA genes
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
>ENV08000097
ABLV01034198
microbial fraction from reduced sediments of the Soudan Mine (Minnesota)
3
94
+
Ser
GCT
[ENA]
¡û
>ENV08000101
ABLV01198439
microbial fraction from reduced sediments of the Soudan Mine (Minnesota)
5
78
+
Ala
CGC
[ENA]
¡û
>ENV08000098
ABLV01048901
microbial fraction from reduced sediments of the Soudan Mine (Minnesota)
9
79
+
Pseudo
TTC
[ENA]
¡û
>ENV08000095
ABLV01004126
microbial fraction from reduced sediments of the Soudan Mine (Minnesota)
13
88
+
Glu
CTC
[ENA]
¡û
>ENV08000096
ABLV01019112
microbial fraction from reduced sediments of the Soudan Mine (Minnesota)
24
109
+
Ser
GGA
[ENA]
¡û
>ENV08000099
ABLV01061476
microbial fraction from reduced sediments of the Soudan Mine (Minnesota)
84
2
-
Leu
CAA
[ENA]
¡û
>ENV08000102
ABLV01283157
microbial fraction from reduced sediments of the Soudan Mine (Minnesota)
85
12
-
Ala
CGC
[ENA]
¡û
>ENV08000100
ABLV01065718
microbial fraction from reduced sediments of the Soudan Mine (Minnesota)
99
23
-
Arg
ACG
[ENA]
¡û
Select
Sequence ID
Genome ID
(or Accession No.)
Phylum/Class
(Sample source for ENV)
Species
Start
End
Direction
AA
Anticodon
Genome/Seq. Info.
Decision
Download Sequence
View ClustalW result
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